2 Month South America Itinerary (Colombia, Ecuador & Peru + Map)

Author Carina Klein
Carina
· 8 min read · 0 comments

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TL;DR

Experience the best of South America with our ultimate 9-week backpacking itinerary through Colombia, Ecuador, and Peru – ancient ruins, tropical beaches, Andean peaks, and Amazon adventures all in one seamless journey.

Planning a South America adventure can be overwhelming – there’s so much to see, so many routes, and limited time. That’s why we’ve mapped out the ultimate Colombia, Ecuador, and Peru backpacking itinerary, day by day, for all 63 days, with top destinations and hidden gems.

No more guessing how long to stay in each city or missing the sights that make South America unforgettable. From Caribbean beaches in Cartagena to Amazon wildlife in Iquitos, Andean peaks in Quito and Cusco, and desert landscapes in Huacachina and Tatacoa, this guide covers it all.

We’ve done the legwork so you can focus on the adventure: hiking waterfalls, spotting condors, island-hopping in the Galapagos, and exploring ancient ruins. Whether you’re a solo traveller, a couple, or a small group, this itinerary is designed for maximum experience with minimum stress.

Get ready to discover South America like a pro – and create memories that last a lifetime.

The Ultimate South America Backpacking Itinerary

Colombia Ecuador Peru Itinerary Map

Part 1: Colombia (3 Weeks)

Route Overview: Cartagena → Tayrona → San Gil → Bogotá → Medellín → Salento → Tatacoa → San Agustín → Popayán → Ipiales

Days 1-3: Cartagena & Caribbean Coast

Historic Caribbean city with vibrant streets and beaches.

Here’s our full 3-day Cartagena itinerary:

Days 4–6: Tayrona National Park

Pristine jungle and secluded beaches on Colombia’s northern coast.

  • Day 4: Way to Tayrona National Park.
  • Day 5: Start multi-day hike through beaches & jungle.
  • Day 6: Swim at Cabo San Juan & Playa Piscina. Way to San Gil.

Here’s our full Tayrona National Park travel guide:

Days 7–8: San Gil & Barichara

Colombia’s adventure capital.

Here’s our full San Gil travel guide:

Days 9–11: Bogotá

Andean capital blending history, culture, and street art.

Here’s our 3-day Bogota itinerary:

Days 12–14: Medellín

Modern city famous for its transformation and culture.

Here’s our 3-day Medellin itinerary:

Days 15–16: Salento

Coffee region town surrounded by wax palms and lush valleys.

Here’s our full Salento travel guide:

Day 17: Tatacoa Desert

Otherworldly desert landscapes.

Here’s our full Tatacoa Desert tour review:

Days 18–19: San Agustín

Archaeological hub with mysterious statues and tombs.

Here’s our full San Agustin travel guide:

Day 20: Popayán

Colonial “White City”.

Day 21: Ipiales

One of the Seven Wonders of Colombia and a border to Ecuador.

  • Day 21: Las Lajas Sanctuary & Ecuador border.

Here’s our full Ipiales travel guide:

Part 2: Ecuador (3 Weeks)

Route Overview: Quito → Cotopaxi → Baños → Cuenca → Galapagos Islands

Days 22–24: Quito

Historic capital perched in the Andes with rich colonial architecture.

Here’s our full 3-day Quito itinerary:

Days 25–26: Baños

Adventure town with waterfalls, swings, and hot springs.

  • Day 25: Cycle or quad along the Ruta de las Cascadas.
  • Day 26: Swing at the End of the World & hot springs.

Here’s our full Baños travel guide:

Days 27–28: Cuenca

Picturesque colonial city with cobblestone streets and rivers.

Here’s our full Cuenca travel guide:

Days 29–33: San Cristobal (Galapagos)

Sea lions and coastal trails.

  • Day 29: Way to Guayaquil, flight to San Cristobal, sea lions along the malecon.
  • Day 30: Tijeretas snorkelling & viewpoints.
  • Day 31: Highlands tour.
  • Day 32: Epic 360° boat tour.
  • Day 33: Way to Isabela.

Here’s our full San Cristobal travel guide:

Days 34–37: Isabela (Galapagos)

Volcanic landscapes, snorkelling, and tortoises.

Here’s our full Isabela travel guide:

Days 38–42: Santa Cruz (Galapagos)

Central island with lava tunnels and amazing Scuba diving.

  • Day 38: Way to Santa Cruz. Charles Darwin Research Station.
  • Day 39: Tortuga Bay & Las Grietas.
  • Day 40: Highlands tour.
  • Day 41: Snorkelling or scuba diving.
  • Day 42: Flight to Guayaquil and travel to Peru.

Here’s our full Santa Cruz travel guide:

Part 3: Peru (3 Weeks)

Route Overview: Trujillo → Chachapoyas → Amazon (Iquitos) → Lima → Paracas → Huacachina → Nazca → Arequipa → Colca Canyon → Puno → Cusco & Machu Picchu

Days 43–44: Trujillo

Archaeological city with ancient Moche and Chimu ruins.

  • Day 43: Chan Chan (the largest pre-Columbian city in South America) and Huacas del Sol & de la Luna.
  • Day 44: Walk Trujillo’s historic centre: Plaza de Armas, churches, free museums.

Days 45–46: Chachapoyas

Andes town surrounded by waterfalls and fortresses.

Here’s our full Chachapoyas travel guide:

Days 47–50: Iquitos & the Amazon Rainforest

Jungle gateway and wildlife encounters.

Here’s our full Iquitos travel guide:

Days 51–52: Lima

Coastal capital blending history, culture, and gastronomy.

  • Day 51: Free walking tour of the historic centre, San Francisco catacombs & museums.
  • Day 52: Barranco street art & Miraflores coastline.

Here’s a full 2-day Lima itinerary:

Day 53: Paracas

Coastal town with wildlife-rich islands and an otherworldly national reserve.

Here’s our full Paracas travel guide:

Day 54: Huacachina

Desert oasis famous for sand dunes and adventure sports.

Here’s our full Huacachina travel guide:

Day 55: Nazca

Home of mysterious ancient geoglyphs in the desert.

Here’s our full review of our Nazca Lines tour:

Days 56–57: Arequipa & Colca Canyon

“White City” with colonial architecture and volcano views.

Here’s our full Arequipa travel guide:

Day 58: Puno & Lake Titicaca

Lake Titicaca base with floating islands.

Here’s our full Puno travel guide:

Days 59–63: Cusco, Sacred Valley & Machu Picchu

Historic Incan capital.

Here’s our full 4-day Cusco itinerary (excluding Machu Picchu):

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